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The Analytical Scientist / Issues / 2026 / April / Why Extraction Still Matters in Food Analysis
Food, Beverage & Agriculture Sample Preparation Business & Entrepreneurship Keynote Interviews

Why Extraction Still Matters in Food Analysis

Ahead of ExTech 2026, Hans-Gerd Janssen weighs in on the challenges and evolution of sample preparation

By James Strachan 04/16/2026 5 min read
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Why Extraction Still Matters in Food Analysis

Overview

Sample preparation remains a critical and challenging step in food analysis due to the complex nature of food matrices. Despite advances in direct analysis techniques, extraction and clean-up processes are essential to protect chromatographic instruments and ensure reliable results.

Background

Food samples contain diverse components such as fats, proteins, sugars, salts, fibers, and water that can interfere with chromatographic systems like LC-MS and GC-MS. Improper sample preparation can lead to instrument damage, contamination, and inaccurate data. Although new direct mass spectrometry methods are emerging, they often lack sensitivity and can contaminate instruments, making traditional extraction methods indispensable. Evaluating new sample preparation techniques requires significant practical testing and investment, which can be a barrier for many laboratories.

Data Highlights

Key challenges in food sample preparation include:

  • Fats clogging reversed-phase LC columns
  • Sugars causing unwanted GC peaks via caramelization
  • Proteins contaminating GC inlets and blocking LC columns
  • Water damaging GC stationary phases at elevated temperatures
  • Salts inducing ion suppression in LC-MS

Key Findings

  • Sample preparation is essential to prevent damage and malfunction of expensive chromatographic instruments.
  • Direct mass spectrometry techniques, while promising, often lack sensitivity and risk instrument contamination.
  • Practical evaluation of new extraction methods is necessary but resource-intensive, limiting adoption.
  • Conferences like ExTech provide valuable opportunities to engage with developers and assess new sample preparation technologies firsthand.
  • Emerging trends include sustainable solvents, molecularly imprinted polymers, metal-organic frameworks, and advanced extraction methods.
  • Automation and early warning systems for sample preparation errors are needed to reduce manual labor and improve reliability.

Clinical Implications

Clinicians and laboratory professionals should recognize that despite technological advances, robust sample preparation remains vital for accurate food analysis. Investment in evaluating and adopting new extraction methods should be balanced against resource constraints, with emphasis on methods that improve efficiency and reduce errors. Engagement with developers at scientific meetings can facilitate informed decisions about integrating novel techniques into routine workflows.

Conclusion

Extraction and sample preparation continue to be foundational in food analysis, ensuring instrument integrity and data quality. Ongoing innovation and practical evaluation are key to advancing these processes and meeting the evolving demands of food compositional analysis.

References

  1. Janssen HG -- Why Extraction Still Matters in Food Analysis

This content is an AI-generated, fully rewritten summary based on a published scholarly article. It does not reproduce the original text and is not a substitute for the original publication. Readers are encouraged to consult the source for full context, data, and methodology.

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About the Author(s)

James Strachan

Over the course of my Biomedical Sciences degree it dawned on me that my goal of becoming a scientist didn’t quite mesh with my lack of affinity for lab work. Thinking on my decision to pursue biology rather than English at age 15 – despite an aptitude for the latter – I realized that science writing was a way to combine what I loved with what I was good at. From there I set out to gather as much freelancing experience as I could, spending 2 years developing scientific content for International Innovation, before completing an MSc in Science Communication. After gaining invaluable experience in supporting the communications efforts of CERN and IN-PART, I joined Texere – where I am focused on producing consistently engaging, cutting-edge and innovative content for our specialist audiences around the world.

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